Dhananjay Bhaskar

Assistant Professor, Biomedical Engineering
University of Wisconsin–Madison

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My research sits at the intersection of AI and biology, spanning AI4Biology, mechanistic learning, geometric deep learning, Neuro-AI, and agentic AI. I am an affiliate of the Data Science Institute, the Biophysics Graduate Program, the Center for Genomic Science Innovation, and WITNe. I also serve on the board of OpScribe-AI.

News

Nov 16, 2026 I’m co-organizing a minisymposium on Geometric and Topological Frameworks for Spatiotemporal Brain Dynamics at SIAM MDS26.
Oct 28, 2026 Neurospectrum, a deep learning framework for neural dynamics is now out in Neurocomputing! Neurospectrum represents brain activity as graph wavelets and uses an autoencoder to dimensionality-reduce this representation while preserving geometry and trajectories. The trajectories are then characterized by a series of geometric and topological descriptors for regression and classification tasks, including classification of OCD.
Oct 16, 2026 Min Wu and I received a FYIM Collaboration Kickstart Award to collaborate on “Mechanistic Modeling of Antigen-Regulated Cortical Actin Oscillations”. I will lead the computational modeling and Dr. Wu will lead the experimental work.
Oct 14, 2026 Jens is presenting our recent work on protein inverse folding at the 8th Molecular Machine Learning Conference (MoML) organized by the MIT Jameel Clinic in Boston.
Sep 19, 2026 I gave a minisymposium talk at the SIAM Great Lakes Section Annual Meeting (GLSIAM 2026): Agentic AI Scientists for Autonomous Modeling and Discovery in Complex Biological Systems.